Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2130 domain-containing protein | RC54_18095 | P47394 | - | 4077689 - 4079098 | 53582.6 |
| Trna-val | Not Available | Not Available | + | 4079227 - 4079301 | Not Available |
| dna polymerase iii subunit epsilon | RC54_18105 | P0A1H0 | - | 4079459 - 4080196 | 26891.9 |
| ribonuclease hi | RC54_18110 | A4G7G3 | - | 4080261 - 4080695 | 15956.8 |
| sam-dependent methyltransferase | RC54_18115 | P75672 | - | 4080785 - 4081579 | 30079.4 |
| hydroxyacylglutathione hydrolase | RC54_18120 | A4G7G5 | + | 4081641 - 4082441 | 28861.3 |
| lytic transglycosylase | RC54_18125 | P0AEZ8 | + | 4082797 - 4084293 | 54878.7 |
| abc transporter atp-binding protein | RC54_18130 | P33916 | - | 4084534 - 4086123 | 58171.6 |
| abc transporter permease | RC54_18135 | P33915 | - | 4086120 - 4087187 | 39649.4 |
| microcin c abc transporter permease yejb | RC54_18140 | P0AFU1 | - | 4087184 - 4088239 | 39082.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.