Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | RC54_17545 | P0DV35 | + | 3950374 - 3951780 | 49927.3 |
| bifunctional diguanylate cyclase/phosphodiesterase | RC54_17550 | Q9I310 | - | 3952025 - 3954112 | 76046.2 |
| phospholipase | RC54_17555 | Q9K0U7 | + | 3954401 - 3955696 | 47515.0 |
| glutathione-disulfide reductase | RC54_17560 | P23189 | - | 3955721 - 3957088 | 48600.9 |
| iron abc transporter permease | RC54_17565 | P21409 | - | 3957153 - 3958820 | 59340.1 |
| abc transporter atp-binding protein | RC54_17570 | O86751 | + | 3958928 - 3960022 | 39430.7 |
| type vi secretion system tip protein vgrg | RC54_17575 | Q9I737 | + | 3960265 - 3963135 | 100582.0 |
| duf4123 domain-containing protein | RC54_17580 | Not Available | + | 3963163 - 3964137 | 36714.6 |
| hypothetical protein | RC54_17585 | Not Available | + | 3964260 - 3966809 | 94956.4 |
| is3 family transposase | RC54_17590 | P51026 | + | 3966826 - 3968060 | 46319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.