Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxyethylthiazole kinase | RC54_06325 | Not Available | - | 1420374 - 1422599 | 83071.5 |
| type vi secretion system tip protein vgrg | RC54_06330 | Q9I737 | - | 1422652 - 1425150 | 92910.6 |
| tetr/acrr family transcriptional regulator | RC54_06335 | Q8X4Z7 | - | 1425571 - 1426176 | 22497.5 |
| efflux rnd transporter periplasmic adaptor subunit | RC54_06340 | P24180 | + | 1426325 - 1427515 | 41670.6 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | RC54_06345 | P31224 | + | 1427532 - 1430681 | 112366.0 |
| adec/adek/oprm family multidrug efflux complex outer membrane factor | RC54_06350 | Q9KJC1 | + | 1430683 - 1432194 | 53707.4 |
| tetr family transcriptional regulator | RC54_06355 | Q9R9T9 | + | 1432191 - 1432808 | 22982.1 |
| mfs transporter | RC54_06360 | Q0K843 | + | 1432961 - 1434187 | 44300.4 |
| amidase | RC54_06365 | O28325 | + | 1434216 - 1435736 | 53990.7 |
| rida family protein | RC54_06370 | P0AEB8 | + | 1435798 - 1436148 | 12217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.