Herbaspirillum rubrisubalbicans B579

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum rubrisubalbicans
StrainB579

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum rubrisubalbicans B579

Accession NumberCP024996.1

Gene Summary

Adenine Count

1082625 bp

Thymine Count

1080380 bp

Guanine Count

1727574 bp

Cytosine Count

1727014 bp

Genome Length

5617593 bp

Protein-coding Genes

4817 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gluconokinaseRC54_04825P46834+1067482 - 106903555912.5
gluconate 5-dehydrogenaseRC54_04830P50199+1069107 - 106990127917.6
l-idonate 5-dehydrogenaseRC54_04835P39346+1069930 - 107096737008.1
methyl-accepting chemotaxis proteinRC54_04840P02942+1071214 - 107274054698.6
erythritol/l-threitol dehydrogenaseRC54_04845A0QXD8-1072737 - 107383139916.3
dihydroxyacetone kinase subunit lRC54_04850Q92EU3-1073855 - 107450522729.3
dihydroxyacetone kinaseRC54_04855Q927E6-1074502 - 107551535145.7
d-threitol dehydrogenaseRC54_04860Q92EU6-1075561 - 107634327377.3
sugar abc transporter substrate-binding proteinRC54_04865A0QYB5-1076340 - 107733235305.8
abc transporter permeaseRC54_04870P0AGI3-1077364 - 107835033195.2

Displaying genes 1091 – 1100 of 4994 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites