Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | RC54_04725 | Q47162 | - | 1040104 - 1042539 | 87560.6 |
| sensor protein | RC54_04730 | P23485 | - | 1042702 - 1043721 | 37556.2 |
| rna polymerase subunit sigma | RC54_04735 | P23484 | - | 1043726 - 1044244 | 19748.7 |
| lysr family transcriptional regulator | RC54_04740 | P77559 | - | 1044417 - 1045334 | 34112.6 |
| histone deacetylase family protein | RC54_04745 | Q3JUN4 | - | 1045418 - 1046437 | 37333.3 |
| mfs transporter | RC54_04750 | P76350 | - | 1046437 - 1047768 | 47438.0 |
| succinate-semialdehyde dehydrogenase i | RC54_04755 | Q9I6M5 | - | 1048046 - 1049500 | 51529.1 |
| abc transporter permease | RC54_04760 | P45169 | - | 1049539 - 1050372 | 30008.5 |
| abc transporter permease | RC54_04765 | P31135 | - | 1050413 - 1051693 | 46618.8 |
| spermidine/putrescine abc transporter substrate-binding protein | RC54_04770 | Q9I6R6 | - | 1051778 - 1052821 | 37753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.