Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 79): aataactgcaattttcga | Not Available | Not Available | + | 893375 - 893754 | Not Available |
| glycoside hydrolase family 16 protein | DYE50_03870 | P45798 | - | 893794 - 894636 | 32094.4 |
| ggdef domain-containing protein | DYE50_03875 | P24222 | + | 894718 - 896097 | 52708.8 |
| aminopeptidase | DYE50_03880 | Q97K30 | + | 896445 - 897794 | 48678.0 |
| atp-dependent clp protease atp-binding subunit clpx | DYE50_03885 | Q73M37 | - | 897830 - 899089 | 45963.8 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DYE50_03890 | Q73M38 | - | 899089 - 899700 | 22443.1 |
| trigger factor | DYE50_03895 | Q73M39 | - | 899837 - 901204 | 51981.8 |
| Trna-gly | Not Available | Not Available | + | 901267 - 901341 | Not Available |
| Trna-gly | Not Available | Not Available | + | 901408 - 901482 | Not Available |
| Trna-leu | Not Available | Not Available | + | 901504 - 901583 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
