Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | DYE50_01465 | P43752 | - | 323496 - 325673 | 82268.4 |
| aromatic amino acid lyase | DYE50_01470 | C5D4K1 | - | 325977 - 327551 | 57902.5 |
| hypothetical protein | DYE50_01475 | Not Available | + | 327665 - 328009 | 11850.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DYE50_01480 | A7ZQV1 | + | 328056 - 328898 | 32233.1 |
| alanine:cation symporter family protein | DYE50_01485 | P44917 | + | 329301 - 330728 | 50058.0 |
| histidinol dehydrogenase | DYE50_01490 | Q8DTQ7 | + | 330824 - 332185 | 47932.2 |
| peptide deformylase | DYE50_01495 | O83738 | + | 332208 - 332783 | 21429.7 |
| methionyl-trna formyltransferase | DYE50_01500 | Q73M65 | + | 332801 - 333796 | 35664.9 |
| pasta domain-containing protein | DYE50_01505 | O51090 | + | 333800 - 334816 | 37152.5 |
| na/pi cotransporter family protein | DYE50_01510 | P54463 | + | 334818 - 336497 | 61966.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
