Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DYE50_10860 | Q9WZY4 | - | 2496730 - 2498004 | 46136.1 |
| site-specific dna-methyltransferase | DYE50_10865 | P28638 | - | 2498078 - 2499055 | 37491.4 |
| peptidase | DYE50_10870 | O05248 | - | 2499224 - 2499958 | 26433.4 |
| hypothetical protein | DYE50_10875 | Q57898 | + | 2499979 - 2501199 | 46545.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DYE50_10880 | Q72VB8 | - | 2501471 - 2503126 | 60978.2 |
| diguanylate cyclase | DYE50_10885 | Q8EGF8 | - | 2503381 - 2505030 | 62587.0 |
| mate family efflux transporter | DYE50_10890 | O34474 | - | 2505027 - 2506397 | 50027.6 |
| hypothetical protein | DYE50_10895 | Not Available | - | 2506394 - 2506963 | 22017.8 |
| cys-trna(pro) deacylase | DYE50_10900 | O31650 | + | 2507071 - 2507559 | 17674.5 |
| hypothetical protein | DYE50_10905 | Not Available | - | 2507556 - 2508245 | 25602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
