Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | DYE50_04865 | B1GZY9 | + | 1149111 - 1150286 | 43396.1 |
| polynucleotide adenylyltransferase pcnb | DYE50_04870 | P0ABF3 | - | 1150406 - 1151491 | 41335.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DYE50_04875 | C4Z3J8 | + | 1151578 - 1152429 | 32036.5 |
| hypothetical protein | DYE50_04880 | Not Available | + | 1152544 - 1156446 | 147096.0 |
| methionine--trna ligase | DYE50_04885 | Q73NT9 | + | 1156522 - 1158852 | 87853.4 |
| had family hydrolase | DYE50_04890 | O32036 | + | 1159142 - 1160446 | 49263.3 |
| transcriptional repressor | DYE50_04895 | P71086 | + | 1160532 - 1160924 | 14754.6 |
| rubrerythrin family protein | DYE50_04900 | Q97FZ9 | + | 1160945 - 1161484 | 20128.5 |
| peptidoglycan bridge formation glycyltransferase fema/femb family protein | DYE50_04905 | Q4L8C6 | + | 1161834 - 1162898 | 40385.2 |
| ribonuclease z | DYE50_04910 | Q73LB4 | + | 1162902 - 1163828 | 34929.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
