Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DYE50_04815 | O07587 | + | 1138146 - 1139336 | 43747.3 |
| glycogen synthase | DYE50_04820 | Q73MC7 | + | 1139366 - 1140844 | 54442.2 |
| 30s ribosomal protein s6 | DYE50_04825 | Q73M32 | + | 1140914 - 1141207 | 11249.6 |
| single-stranded dna-binding protein | DYE50_04830 | O83101 | + | 1141244 - 1141750 | 18462.2 |
| 30s ribosomal protein s18 | DYE50_04835 | Q73M34 | + | 1141767 - 1142078 | 11620.0 |
| 50s ribosomal protein l9 | DYE50_04840 | Q73M35 | + | 1142173 - 1142712 | 19867.6 |
| replicative dna helicase | DYE50_04845 | O83097 | + | 1142789 - 1144123 | 49236.2 |
| hypothetical protein | DYE50_04850 | Not Available | - | 1144231 - 1145931 | 61420.8 |
| hypothetical protein | DYE50_04855 | Not Available | - | 1145985 - 1147790 | 66370.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DYE50_04860 | Q73JF6 | - | 1147793 - 1149028 | 46697.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
