Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DYE50_04715 | Q9R9N2 | - | 1116727 - 1117947 | 47939.7 |
| flippase | DYE50_04720 | P37746 | - | 1117940 - 1119400 | 54721.4 |
| hypothetical protein | DYE50_04725 | Not Available | - | 1119404 - 1121098 | 64020.4 |
| abc transporter permease | DYE50_04730 | Q58902 | + | 1121151 - 1122578 | 52383.4 |
| hypothetical protein | DYE50_04735 | Not Available | + | 1122578 - 1123873 | 48260.2 |
| outer membrane lipoprotein-sorting protein | DYE50_04740 | Not Available | + | 1123892 - 1124701 | 30203.9 |
| hypothetical protein | DYE50_04745 | Not Available | + | 1124710 - 1126086 | 52763.7 |
| abc transporter atp-binding protein | DYE50_04750 | Q58206 | - | 1126110 - 1126835 | 26672.3 |
| glucose-1-phosphate thymidylyltransferase | DYE50_04755 | P55255 | + | 1126909 - 1127784 | 32216.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DYE50_04760 | O27818 | + | 1127819 - 1128418 | 22563.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
