Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | DYE50_04665 | P39858 | + | 1077715 - 1078743 | 38708.4 |
| hypothetical protein | DYE50_04670 | Not Available | + | 1078838 - 1090477 | 417231.0 |
| rpn family recombination-promoting nuclease/putative transposase | DYE50_04675 | Not Available | - | 1090672 - 1091739 | 40991.2 |
| rpn family recombination-promoting nuclease/putative transposase | DYE50_04680 | Not Available | - | 1092033 - 1092989 | 36728.1 |
| hypothetical protein | DYE50_04685 | Not Available | + | 1093410 - 1107629 | 511801.0 |
| membrane protein insertase yidc | DYE50_04690 | O51398 | - | 1107749 - 1110559 | 107918.0 |
| glycosyltransferase | DYE50_04695 | P26402 | - | 1110609 - 1111799 | 45651.0 |
| membrane protein insertase yidc | DYE50_04700 | B1GZ50 | - | 1111820 - 1114597 | 106331.0 |
| hypothetical protein | DYE50_04705 | Not Available | - | 1114650 - 1115723 | 42564.4 |
| glycosyltransferase family 2 protein | DYE50_04710 | P9WMY2 | - | 1115733 - 1116674 | 35751.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
