Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | + | 1037572 - 1037643 | Not Available |
| 30s ribosomal protein s20 | DYE50_04520 | Q73M02 | + | 1037723 - 1038001 | 10589.9 |
| integration host factor subunit beta | DYE50_04525 | Q45722 | + | 1038103 - 1038414 | 11635.2 |
| apolipoprotein n-acyltransferase | DYE50_04530 | P61037 | + | 1038344 - 1039960 | 61355.2 |
| polymer-forming cytoskeletal protein | DYE50_04535 | Not Available | + | 1039947 - 1040366 | 15293.1 |
| transcription termination factor rho | DYE50_04540 | O83281 | + | 1040551 - 1042464 | 71724.3 |
| hypothetical protein | DYE50_04545 | O83461 | - | 1042525 - 1043622 | 41785.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DYE50_04550 | Q73N90 | - | 1043645 - 1044748 | 39860.4 |
| hypothetical protein | DYE50_04555 | Not Available | - | 1044773 - 1046281 | 57565.4 |
| undecaprenyl-phosphate galactose phosphotransferase wbap | DYE50_04560 | P26406 | - | 1046418 - 1047842 | 53948.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
