Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | + | 1027952 - 1028024 | Not Available |
| Trna-val | Not Available | Not Available | + | 1028032 - 1028104 | Not Available |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DYE50_04475 | O34753 | + | 1028272 - 1029327 | 39140.6 |
| udp-n-acetylmuramate--l-alanine ligase | DYE50_04480 | O83361 | + | 1029352 - 1030815 | 53251.6 |
| hypothetical protein | DYE50_04485 | Not Available | + | 1030882 - 1031877 | 35024.7 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DYE50_04490 | Q73L91 | + | 1031970 - 1033115 | 41726.2 |
| cvpa family protein | DYE50_04495 | Not Available | + | 1033112 - 1033594 | 17465.8 |
| dna polymerase iii | DYE50_04500 | P63976 | + | 1033594 - 1034814 | 45855.7 |
| pas domain s-box protein | DYE50_04505 | O31661 | + | 1034825 - 1036069 | 46865.3 |
| sigma-54-dependent fis family transcriptional regulator | DYE50_04510 | Q06065 | + | 1036072 - 1037451 | 50489.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
