Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | DYE50_04415 | B8DZS1 | - | 1013114 - 1014370 | 45877.2 |
| spiro-spasm protein | DYE50_04420 | O83309 | + | 1014444 - 1016066 | 60941.9 |
| hypothetical protein | DYE50_04425 | Not Available | + | 1016041 - 1016997 | 36318.2 |
| methyltransferase domain-containing protein | DYE50_04430 | Q58463 | + | 1016994 - 1019498 | 92995.8 |
| atp-grasp domain-containing protein | DYE50_04435 | Q981V0 | + | 1019498 - 1021135 | 59689.4 |
| n-acetylmuramoyl-l-alanine amidase | DYE50_04440 | P54525 | + | 1021150 - 1022181 | 37816.8 |
| hypothetical protein | DYE50_04445 | Not Available | + | 1022229 - 1022699 | 17344.3 |
| flagellar protein | DYE50_04450 | P18193 | + | 1022795 - 1023934 | 41858.0 |
| (p)ppgpp synthetase | DYE50_04455 | P39583 | + | 1024049 - 1025299 | 47872.2 |
| helicase | DYE50_04460 | P44680 | + | 1025357 - 1027810 | 92127.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
