Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rrna methyltransferase | DYE50_04365 | C4L7I7 | + | 1003740 - 1004984 | 46474.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DYE50_04370 | Q73MR1 | + | 1005012 - 1005974 | 36752.2 |
| hypothetical protein | DYE50_04375 | O83897 | - | 1005971 - 1006189 | 8058.52 |
| tatd family deoxyribonuclease | DYE50_04380 | P37545 | + | 1006322 - 1007074 | 28451.7 |
| phosphoribosyltransferase | DYE50_04385 | D5E7U7 | + | 1007130 - 1007726 | 23083.5 |
| hypothetical protein | DYE50_04390 | Not Available | - | 1007792 - 1008115 | 11863.2 |
| fumarate hydrolyase | DYE50_04395 | E9AE57 | - | 1008099 - 1009694 | 57713.6 |
| hypothetical protein | DYE50_04400 | Not Available | + | 1009836 - 1011929 | 76689.3 |
| ribonuclease hii | DYE50_04405 | Q73MG1 | + | 1011951 - 1012553 | 22532.6 |
| duf3276 family protein | DYE50_04410 | Not Available | + | 1012644 - 1013033 | 14809.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
