Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n,n'-diacetylchitobiose phosphorylase | DYE50_04315 | Q76IQ9 | + | 988484 - 990895 | 90543.4 |
| glycosyl hydrolase family 53 | DYE50_04320 | O07013 | - | 991118 - 993103 | 74073.9 |
| spore coat protein coth | DYE50_04325 | Not Available | + | 993199 - 994707 | 57973.7 |
| m23 family peptidase | DYE50_04330 | P0AFT0 | + | 994711 - 995712 | 37991.6 |
| pts sugar transporter subunit iic | DYE50_04335 | Not Available | + | 995798 - 996862 | 36157.6 |
| fha domain-containing protein | DYE50_04340 | O65934 | + | 996906 - 997253 | 12596.3 |
| hypothetical protein | DYE50_04345 | Not Available | + | 997263 - 998279 | 38040.2 |
| serine/threonine protein kinase | DYE50_04350 | Q8XJL8 | + | 998383 - 1000056 | 62805.7 |
| trna 2-thiocytidine biosynthesis protein ttca | DYE50_04355 | Q5WYK1 | + | 1000209 - 1000919 | 27229.8 |
| endopeptidase la | DYE50_04360 | O83536 | + | 1000968 - 1003721 | 102681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
