Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DYE50_04215 | O34606 | + | 967086 - 967748 | 24515.7 |
| amino acid abc transporter permease | DYE50_04220 | O34606 | + | 967726 - 968421 | 25809.7 |
| amino acid abc transporter atp-binding protein | DYE50_04225 | P27675 | + | 968514 - 969266 | 28342.8 |
| amino acid abc transporter substrate-binding protein | DYE50_04230 | O34563 | + | 969339 - 970163 | 29915.8 |
| atp-binding cassette domain-containing protein | DYE50_04235 | Q0K2U3 | + | 970361 - 970723 | 13762.8 |
| Trna-met | Not Available | Not Available | + | 970952 - 971027 | Not Available |
| transcriptional repressor nrdr | DYE50_04245 | Q73N26 | - | 971099 - 971602 | 19759.6 |
| hypothetical protein | DYE50_04250 | Not Available | - | 971623 - 972309 | 26256.7 |
| abc transporter atp-binding protein | DYE50_04255 | Q890R2 | - | 972316 - 973047 | 26579.5 |
| biotin transporter bioy | DYE50_04260 | O57898 | - | 973059 - 973637 | 20631.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
