Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DYE50_04165 | Not Available | - | 954778 - 956472 | 66800.5 |
| restriction endonuclease subunit s | DYE50_04170 | Q60296 | - | 956492 - 957721 | 45835.2 |
| n-6 dna methylase | DYE50_04175 | Q60297 | - | 957906 - 959645 | 65101.3 |
| metq/nlpa family abc transporter substrate-binding protein | DYE50_04180 | P28635 | + | 959848 - 960672 | 29833.0 |
| peptide-methionine (s)-s-oxide reductase | DYE50_04185 | A9KPX7 | + | 960681 - 961184 | 19336.9 |
| metq/nlpa family abc transporter substrate-binding protein | DYE50_04190 | Q8ZH40 | + | 961194 - 962030 | 30478.9 |
| fad-binding protein | DYE50_04195 | H6LBS1 | + | 962041 - 963411 | 49443.7 |
| pyridoxal phosphate-dependent aminotransferase | DYE50_04200 | P77806 | + | 963420 - 964583 | 43496.8 |
| hypothetical protein | DYE50_04205 | Not Available | + | 964649 - 965551 | 32882.1 |
| hypothetical protein | DYE50_04210 | Not Available | - | 965628 - 966842 | 43296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
