Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_04115 | O83451 | - | 941167 - 941598 | 16123.5 |
| ornithine carbamoyltransferase | DYE50_04120 | Q8RCA4 | - | 941644 - 942597 | 35437.7 |
| radical sam protein | DYE50_04125 | Q58234 | - | 942690 - 943316 | 23624.6 |
| amidohydrolase | DYE50_04130 | P80092 | - | 943340 - 944506 | 42138.0 |
| atp-binding cassette domain-containing protein | DYE50_04135 | Q832Y6 | + | 944658 - 945737 | 39454.1 |
| abc transporter permease | DYE50_04140 | Q9KTJ6 | + | 945876 - 946556 | 24551.9 |
| l-lactate dehydrogenase | DYE50_04145 | Q815X8 | + | 946599 - 947561 | 34541.2 |
| type i restriction endonuclease subunit r | DYE50_04150 | Q60295 | - | 947656 - 950886 | 125477.0 |
| fic family protein | DYE50_04155 | B4F6I5 | - | 950933 - 952231 | 50423.4 |
| hypothetical protein | DYE50_04160 | P96329 | - | 952383 - 954740 | 92087.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
