Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | + | 901644 - 901716 | Not Available |
| Trna-arg | Not Available | Not Available | + | 901736 - 901809 | Not Available |
| Trna-his | Not Available | Not Available | + | 901852 - 901925 | Not Available |
| zip family metal transporter | DYE50_03930 | Q6P6S2 | + | 902067 - 902852 | 27575.8 |
| flavodoxin | DYE50_03935 | P00321 | - | 902951 - 903358 | 14088.2 |
| duf3793 family protein | DYE50_03940 | Not Available | - | 903355 - 903936 | 22067.9 |
| diguanylate cyclase | DYE50_03945 | A0A0H3AFM6 | - | 904089 - 905510 | 53706.2 |
| tetr/acrr family transcriptional regulator | DYE50_03950 | Q8G2M8 | - | 905567 - 906193 | 23759.4 |
| hypothetical protein | DYE50_03955 | Q58957 | + | 906342 - 908750 | 89257.1 |
| outer membrane lipoprotein-sorting protein | DYE50_03960 | O83768 | + | 908996 - 909793 | 30041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
