Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_03815 | Not Available | + | 882413 - 883366 | 36982.0 |
| hypothetical protein | DYE50_03820 | Not Available | + | 883455 - 884405 | 36292.4 |
| duf3990 domain-containing protein | DYE50_03825 | Not Available | + | 885043 - 885720 | 25864.9 |
| xre family transcriptional regulator | DYE50_03830 | Not Available | + | 885698 - 886378 | 25948.7 |
| capa family protein | DYE50_03835 | P19579 | - | 886430 - 887569 | 43360.7 |
| spore coat protein | DYE50_03840 | Q58465 | - | 887545 - 888639 | 40491.9 |
| tigr03546 family protein | DYE50_03845 | O83493 | + | 888696 - 889208 | 19072.2 |
| tigr03545 family protein | DYE50_03850 | O83494 | + | 889201 - 891477 | 83095.8 |
| yebc/pmpr family dna-binding transcriptional regulator | DYE50_03855 | P62042 | + | 891561 - 892304 | 26272.7 |
| crossover junction endodeoxyribonuclease ruvc | DYE50_03860 | O83530 | + | 892549 - 893046 | 18202.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
