Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | DYE50_03565 | Q97F61 | + | 817062 - 818675 | 59580.6 |
| carbamoyl-phosphate synthase small subunit | DYE50_03570 | Q71YI0 | + | 818698 - 819891 | 43186.4 |
| hypothetical protein | DYE50_03575 | Not Available | + | 819954 - 820784 | 31837.5 |
| sigma-70 family rna polymerase sigma factor | DYE50_03580 | Not Available | + | 820930 - 821172 | 9385.66 |
| mate family efflux transporter | DYE50_03585 | Q9WZS2 | + | 821176 - 822537 | 49428.4 |
| formylglycine-generating enzyme family protein | DYE50_03590 | V9TSX0 | - | 822512 - 823267 | 27825.6 |
| arac family transcriptional regulator | DYE50_03595 | Q00753 | + | 823414 - 824250 | 32923.9 |
| glycoside hydrolase family 5 protein | DYE50_03600 | A3DJ77 | - | 824247 - 825950 | 65119.4 |
| carbamoyl-phosphate synthase large subunit | DYE50_03605 | A9KI94 | + | 826043 - 829162 | 114232.0 |
| glutamate synthase subunit beta | DYE50_03610 | O34399 | - | 829212 - 830747 | 56170.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
