Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerc | DYE50_03415 | Q73NE4 | + | 772287 - 773186 | 33823.5 |
| methyl-accepting chemotaxis protein | DYE50_03420 | P39214 | + | 773419 - 775389 | 70776.8 |
| atp-dependent protease subunit hslv | DYE50_03425 | P61478 | + | 775455 - 775994 | 19431.4 |
| atp-dependent protease atpase subunit hslu | DYE50_03430 | Q73NE3 | + | 775996 - 777468 | 54765.6 |
| dna alkylation repair protein | DYE50_03435 | Not Available | + | 777506 - 778198 | 26934.4 |
| diguanylate cyclase | DYE50_03440 | Q8X8Q3 | - | 778195 - 780153 | 73156.4 |
| hypothetical protein | DYE50_03445 | Not Available | + | 780283 - 781476 | 46520.0 |
| dihydroxy-acid dehydratase | DYE50_03450 | C4ZAW6 | - | 781654 - 783351 | 59614.5 |
| ggdef domain-containing protein | DYE50_03455 | Q8X8Q3 | - | 783467 - 785278 | 68600.7 |
| atp-grasp domain-containing protein | DYE50_03460 | O51927 | - | 785484 - 786836 | 51110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
