Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | DYE50_03315 | Q9HYT3 | - | 744439 - 746130 | 64517.7 |
| duf4912 domain-containing protein | DYE50_03320 | O83378 | + | 746241 - 746915 | 25547.4 |
| duf1957 domain-containing protein | DYE50_03325 | Q5JDJ7 | + | 746921 - 748525 | 60221.6 |
| hypothetical protein | DYE50_03330 | O83559 | - | 748531 - 749844 | 48128.0 |
| hypothetical protein | DYE50_03335 | O83827 | + | 749960 - 753139 | 119669.0 |
| hamp domain-containing protein | DYE50_03340 | Not Available | + | 753146 - 758038 | 182901.0 |
| hypothetical protein | DYE50_03345 | Not Available | + | 758067 - 758420 | 12669.1 |
| hypothetical protein | DYE50_03350 | O83671 | - | 758430 - 759173 | 29117.6 |
| transcriptional regulator mraz | DYE50_03355 | Q73NF6 | + | 759339 - 759794 | 17463.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DYE50_03360 | P62477 | + | 759833 - 760825 | 37428.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
