Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_03265 | O83762 | - | 735236 - 736324 | 39525.8 |
| cytidine deaminase | DYE50_03270 | Q9S3M0 | + | 736404 - 736826 | 15171.1 |
| helix-turn-helix domain-containing protein | DYE50_03275 | P71012 | + | 736965 - 737615 | 24401.3 |
| hypothetical protein | DYE50_03280 | Not Available | + | 737682 - 738896 | 45772.4 |
| hypothetical protein | DYE50_03285 | Not Available | + | 738906 - 739484 | 21609.7 |
| hypothetical protein | DYE50_03290 | O83109 | + | 739509 - 740081 | 20177.3 |
| mate family efflux transporter | DYE50_03295 | O34474 | + | 740082 - 741425 | 48480.0 |
| lyttr family transcriptional regulator | DYE50_03300 | Q7A3W9 | + | 741480 - 742298 | 30877.2 |
| hypothetical protein | DYE50_03305 | Not Available | + | 742492 - 743193 | 25362.6 |
| gggtgrt protein | DYE50_03310 | Not Available | + | 743211 - 744248 | 36738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
