Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | DYE50_03215 | P71052 | + | 723089 - 724591 | 55653.1 |
| degt/dnrj/eryc1/strs aminotransferase family protein | DYE50_03220 | P39623 | + | 724646 - 725836 | 44269.7 |
| hypothetical protein | DYE50_03225 | Q0QLF2 | + | 725826 - 728030 | 81903.1 |
| ferredoxin | DYE50_03230 | Q0QLF3 | + | 728027 - 728515 | 18034.2 |
| hypothetical protein | DYE50_03235 | H9TB19 | + | 728463 - 729311 | 31948.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DYE50_03240 | Q73JQ7 | - | 729345 - 730400 | 40174.7 |
| hamp domain-containing protein | DYE50_03245 | Q88KP1 | - | 730418 - 732505 | 75002.6 |
| holliday junction branch migration dna helicase ruvb | DYE50_03250 | P61538 | - | 732623 - 733639 | 37422.2 |
| holliday junction branch migration protein ruva | DYE50_03255 | Q73LJ9 | - | 733728 - 734369 | 23502.4 |
| hypothetical protein | DYE50_03260 | O83761 | - | 734369 - 735226 | 31487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
