Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sufs family cysteine desulfurase | DYE50_03165 | O32164 | + | 711896 - 713134 | 45042.8 |
| tigr01212 family radical sam protein | DYE50_03170 | O35008 | + | 713146 - 714081 | 34689.8 |
| precorrin-2 c(20)-methyltransferase | DYE50_03175 | Q58181 | - | 714065 - 714781 | 26072.7 |
| preprotein translocase subunit seca | DYE50_03180 | Q73LG6 | - | 714880 - 717642 | 104760.0 |
| Trna-pro | Not Available | Not Available | + | 717723 - 717796 | Not Available |
| hypothetical protein | DYE50_03190 | Not Available | - | 717830 - 719062 | 46372.7 |
| rna pseudouridine synthase | DYE50_03195 | Q1RJX7 | + | 719069 - 719773 | 25823.4 |
| hypothetical protein | DYE50_03200 | Not Available | + | 719836 - 720354 | 19239.8 |
| hypothetical protein | DYE50_03205 | Not Available | + | 720366 - 721703 | 47428.3 |
| ggdef domain-containing protein | DYE50_03210 | Q73RG3 | + | 721717 - 723105 | 52708.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
