Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3781 domain-containing protein | DYE50_02915 | Not Available | + | 658706 - 658969 | 10079.2 |
| hypothetical protein | DYE50_02920 | Not Available | + | 658984 - 659613 | 24714.6 |
| dfsb family protein | DYE50_02925 | Not Available | + | 659626 - 660174 | 21259.3 |
| radical sam protein | DYE50_02930 | Q58096 | + | 660184 - 661068 | 34015.2 |
| nimc/nima family protein | DYE50_02935 | Not Available | + | 661129 - 661527 | 15082.9 |
| aspartate 1-decarboxylase | DYE50_02940 | A6LWN4 | - | 661544 - 661897 | 13056.8 |
| type iii pantothenate kinase | DYE50_02945 | Q6MHI0 | - | 661907 - 662677 | 27601.7 |
| hypothetical protein | DYE50_02950 | Q5JF17 | - | 662707 - 663426 | 25111.9 |
| flavoprotein | DYE50_02955 | O35033 | - | 663423 - 663968 | 19619.1 |
| pantoate--beta-alanine ligase | DYE50_02960 | Q6MHI2 | - | 664164 - 664919 | 28319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
