Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DYE50_02865 | C3P2P9 | + | 648997 - 649398 | 15104.1 |
| anti-sigma factor antagonist | DYE50_02870 | O50230 | - | 649410 - 649709 | 10737.4 |
| zinc-ribbon domain-containing protein | DYE50_02875 | V9TSX0 | - | 649736 - 650716 | 35405.0 |
| redox-sensing transcriptional repressor rex | DYE50_02880 | P60383 | + | 650781 - 651392 | 22320.4 |
| lysine--trna ligase | DYE50_02885 | O83650 | - | 651476 - 653104 | 62417.6 |
| sodium-dependent transporter | DYE50_02890 | O34383 | - | 653370 - 654767 | 51094.9 |
| aminotransferase class v-fold plp-dependent enzyme | DYE50_02895 | O50584 | + | 654937 - 655971 | 38410.9 |
| haloacid dehalogenase-like hydrolase | DYE50_02900 | Not Available | + | 656060 - 657112 | 40063.6 |
| dna-deoxyinosine glycosylase | DYE50_02905 | Q8TTH3 | - | 657109 - 657633 | 19767.5 |
| yafy family transcriptional regulator | DYE50_02910 | O34920 | + | 657684 - 658655 | 36348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
