Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | DYE50_02465 | Q73NV5 | + | 534402 - 534776 | 13618.9 |
| 30s ribosomal protein s7 | DYE50_02470 | Q73NV4 | + | 534797 - 535267 | 17572.4 |
| elongation factor tu | DYE50_02475 | Q73PN3 | + | 535886 - 537073 | 43345.0 |
| 30s ribosomal protein s10 | DYE50_02480 | Q73PN2 | + | 537169 - 537477 | 11458.2 |
| 50s ribosomal protein l3 | DYE50_02485 | Q73PN1 | + | 537615 - 538235 | 22509.4 |
| 50s ribosomal protein l4 | DYE50_02490 | P61070 | + | 538250 - 538897 | 24205.2 |
| 50s ribosomal protein l23 | DYE50_02495 | Q73PN0 | + | 538900 - 539184 | 10372.8 |
| 50s ribosomal protein l2 | DYE50_02500 | Q73PM9 | + | 539210 - 540034 | 29847.4 |
| 30s ribosomal protein s19 | DYE50_02505 | Q73PM8 | + | 540052 - 540330 | 10313.6 |
| 50s ribosomal protein l22 | DYE50_02510 | Q73PM7 | + | 540342 - 540698 | 13258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
