Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | DYE50_02315 | Q0TV42 | - | 496559 - 497800 | 45152.4 |
| sodium:proton exchanger | DYE50_02320 | Q9KI10 | - | 497865 - 499967 | 74615.0 |
| abc transporter atp-binding protein | DYE50_02325 | Q1QE80 | - | 500051 - 501055 | 37164.2 |
| patatin family protein | DYE50_02330 | P39407 | - | 501052 - 501897 | 31920.5 |
| iron abc transporter permease | DYE50_02335 | Q44123 | - | 501902 - 503542 | 59095.3 |
| extracellular solute-binding protein | DYE50_02340 | P43951 | - | 503532 - 504524 | 35934.8 |
| gtpase era | DYE50_02345 | Q73LG9 | + | 504689 - 505624 | 35209.7 |
| ribose-5-phosphate isomerase rpia | DYE50_02350 | Q73M68 | - | 505852 - 506571 | 25946.3 |
| type i 3-dehydroquinate dehydratase | DYE50_02355 | Q9SQT8 | - | 506585 - 508078 | 55947.1 |
| anthranilate synthase component i | DYE50_02360 | P21690 | + | 508189 - 509667 | 55123.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
