Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylanase deacetylase | DYE50_02215 | P83513 | + | 472872 - 473492 | 23342.2 |
| response regulator | DYE50_02220 | Q9KSB1 | + | 473541 - 474569 | 38681.7 |
| chitin-binding protein | DYE50_02225 | Not Available | + | 474652 - 475347 | 23919.3 |
| dna-binding response regulator | DYE50_02230 | Q5HPC3 | + | 475340 - 476032 | 25925.4 |
| sensor histidine kinase | DYE50_02235 | O34638 | + | 476048 - 477442 | 52393.3 |
| hsp20/alpha crystallin family protein | DYE50_02240 | Q4UJB1 | - | 477561 - 478004 | 16609.4 |
| hypothetical protein | DYE50_02245 | Not Available | + | 478385 - 479878 | 57550.6 |
| transketolase | DYE50_02250 | O83571 | + | 479993 - 481966 | 70690.5 |
| prolipoprotein diacylglyceryl transferase | DYE50_02255 | O83824 | - | 482227 - 483213 | 37267.8 |
| mind/para family protein | DYE50_02260 | O25678 | - | 483210 - 484325 | 40678.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
