Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | DYE50_01965 | Q9KI14 | + | 420272 - 420664 | 14801.3 |
| eama family transporter | DYE50_01970 | O29470 | - | 420701 - 421597 | 33068.7 |
| nucleoid-structuring protein h-ns | DYE50_01975 | O06334 | + | 421747 - 422721 | 36411.6 |
| sugar kinase | DYE50_01980 | D4GSE6 | - | 422837 - 423862 | 37680.6 |
| methyl-accepting chemotaxis protein | DYE50_01985 | Q9HW91 | + | 424109 - 426211 | 75263.1 |
| histidine phosphatase family protein | DYE50_01990 | Q11SV1 | - | 426223 - 426759 | 20332.4 |
| peptidylprolyl isomerase | DYE50_01995 | Q7CFU4 | - | 426785 - 427321 | 18793.0 |
| gnat family n-acetyltransferase | DYE50_02000 | Not Available | + | 427441 - 428322 | 33413.6 |
| nudix domain-containing protein | DYE50_02005 | Q8DD17 | + | 428350 - 428874 | 19811.7 |
| hypothetical protein | DYE50_02010 | Not Available | + | 428899 - 429432 | 19446.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
