Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmannosamine-6-phosphate 2-epimerase | DYE50_11460 | Not Available | + | 2634892 - 2635299 | 16366.1 |
| hypothetical protein | DYE50_11465 | Not Available | - | 2636565 - 2636786 | 8540.28 |
| duf3990 domain-containing protein | DYE50_11470 | Not Available | - | 2636788 - 2637360 | 21480.3 |
| duf3791 domain-containing protein | DYE50_11475 | Not Available | - | 2637357 - 2637644 | 11324.3 |
| 3-deoxy-7-phosphoheptulonate synthase | DYE50_11480 | Q9WYH8 | + | 2637744 - 2639672 | 70372.8 |
| ggdef domain-containing protein | DYE50_11485 | Q8X8Q3 | - | 2639801 - 2640826 | 39483.2 |
| glycoside hydrolase family 5 protein | DYE50_11490 | P20847 | - | 2640963 - 2642126 | 43360.2 |
| glucan endo-1,3-beta-d-glucosidase | DYE50_11495 | P23903 | - | 2642281 - 2644563 | 84675.6 |
| hypothetical protein | DYE50_11500 | Not Available | - | 2644578 - 2644775 | 7629.9 |
| hypothetical protein | DYE50_11505 | Not Available | - | 2644806 - 2645708 | 31276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
