Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2271 domain-containing protein | DYE50_11260 | Not Available | + | 2581576 - 2582214 | 23207.2 |
| hypothetical protein | DYE50_11265 | Not Available | + | 2582238 - 2583215 | 36451.4 |
| flavodoxin family protein | DYE50_11270 | Q58483 | + | 2583242 - 2583814 | 20732.8 |
| alpha/beta hydrolase | DYE50_11275 | Q50681 | + | 2583859 - 2584767 | 34415.9 |
| leucine--trna ligase | DYE50_11280 | Q73K81 | + | 2584841 - 2587381 | 96460.4 |
| methyl-accepting chemotaxis protein | DYE50_11285 | P39214 | + | 2587660 - 2589864 | 80728.9 |
| hypothetical protein | DYE50_11290 | Not Available | + | 2589879 - 2590454 | 21987.8 |
| muramidase | DYE50_11295 | O51481 | - | 2590458 - 2591084 | 23317.9 |
| dna repair protein radc | DYE50_11300 | Q2FG75 | + | 2591213 - 2591917 | 26066.6 |
| pega domain-containing protein | DYE50_11305 | Not Available | + | 2591948 - 2592463 | 19317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
