Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-cystine-binding protein tcyk | DYE50_11110 | O34852 | - | 2551087 - 2551908 | 30291.2 |
| lysr family transcriptional regulator | DYE50_11115 | P45600 | - | 2552092 - 2553012 | 34682.8 |
| nitrogenase | DYE50_11120 | P0CW50 | - | 2553019 - 2554491 | 55066.6 |
| hydrogenase | DYE50_11125 | O07643 | - | 2554501 - 2555829 | 49124.8 |
| dinitrogenase iron-molybdenum cofactor biosynthesis protein | DYE50_11130 | P20627 | - | 2555832 - 2556260 | 15099.7 |
| flavodoxin | DYE50_11135 | Q57746 | + | 2556479 - 2556886 | 14977.9 |
| glutathione peroxidase | DYE50_11140 | P38143 | + | 2556914 - 2557456 | 20260.0 |
| nad-dependent epimerase/dehydratase family protein | DYE50_11145 | Q9SA52 | - | 2557642 - 2558604 | 36864.9 |
| iron-containing alcohol dehydrogenase | DYE50_11150 | Q04944 | + | 2558627 - 2559805 | 42902.9 |
| nudix domain-containing protein | DYE50_11155 | B7VB54 | - | 2559828 - 2560316 | 18395.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
