Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmannosamine-6-phosphate 2-epimerase | DYE50_11010 | Not Available | + | 2531283 - 2531423 | 4938.87 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DYE50_11015 | Q8RAC5 | + | 2531466 - 2533229 | 64704.4 |
| abc transporter permease subunit | DYE50_11020 | P40401 | - | 2533410 - 2534369 | 35187.5 |
| hypothetical protein | DYE50_11025 | P20627 | - | 2534447 - 2534830 | 14374.9 |
| hydrogenase | DYE50_11030 | P20621 | - | 2534851 - 2536206 | 49504.7 |
| nitrogenase | DYE50_11035 | P55170 | - | 2536203 - 2537675 | 54699.6 |
| abc transporter substrate-binding protein | DYE50_11040 | Not Available | - | 2537706 - 2538797 | 40965.5 |
| abc transporter permease subunit | DYE50_11045 | P40401 | - | 2538836 - 2539756 | 34241.5 |
| abc transporter atp-binding protein | DYE50_11050 | P38046 | - | 2539753 - 2540607 | 32174.9 |
| hydrogenase | DYE50_11055 | P0CW54 | - | 2540781 - 2542139 | 49461.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
