Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DYE50_10960 | P39325 | + | 2520367 - 2521374 | 36942.1 |
| putative manganese-dependent inorganic diphosphatase | DYE50_10965 | Q8XIQ9 | - | 2521422 - 2523080 | 61688.2 |
| duf1846 domain-containing protein | DYE50_10970 | Q03JW5 | - | 2523084 - 2524559 | 54882.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DYE50_10975 | Q8R7C1 | - | 2524712 - 2525881 | 41292.8 |
| plp-dependent cysteine synthase family protein | DYE50_10980 | P32260 | - | 2525951 - 2526943 | 35818.8 |
| abc transporter atp-binding protein | DYE50_10985 | O31711 | - | 2526957 - 2527613 | 23968.9 |
| abc transporter permease | DYE50_10990 | P44252 | - | 2527610 - 2528821 | 43563.0 |
| duf4418 family protein | DYE50_10995 | Not Available | - | 2528806 - 2529024 | 7872.32 |
| abc transporter substrate-binding protein | DYE50_11000 | Not Available | - | 2529034 - 2530098 | 38505.9 |
| abc transporter atp-binding protein | DYE50_11005 | Q63A38 | - | 2530290 - 2531066 | 28429.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
