Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DYE50_10910 | J9VJP1 | + | 2508360 - 2509532 | 42996.2 |
| abc transporter permease | DYE50_10915 | Not Available | - | 2509609 - 2510421 | 31370.1 |
| hypothetical protein | DYE50_10920 | Not Available | - | 2510425 - 2511234 | 30375.2 |
| atp-binding cassette domain-containing protein | DYE50_10925 | P46903 | - | 2511250 - 2512203 | 35991.8 |
| arac family transcriptional regulator | DYE50_10930 | P96660 | + | 2512363 - 2513283 | 35207.9 |
| had family hydrolase | DYE50_10935 | Q9I767 | + | 2513285 - 2513944 | 25168.1 |
| 3-phosphoglycerate dehydrogenase | DYE50_10940 | O29445 | - | 2514059 - 2515237 | 41563.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DYE50_10945 | Q71VT6 | - | 2515338 - 2516507 | 42720.2 |
| formate c-acetyltransferase | DYE50_10950 | Q5HKH9 | + | 2517032 - 2519326 | 85613.6 |
| pyruvate formate lyase-activating protein | DYE50_10955 | O68575 | + | 2519584 - 2520336 | 28850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
