Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_10810 | Not Available | - | 2482539 - 2482958 | 15938.0 |
| pts sugar transporter subunit iia | DYE50_10815 | P71012 | - | 2483039 - 2483485 | 16383.1 |
| hypothetical protein | DYE50_10820 | Not Available | + | 2483567 - 2483977 | 15392.7 |
| radical sam protein | DYE50_10825 | Q58087 | + | 2483979 - 2484986 | 37758.0 |
| 4-alpha-glucanotransferase | DYE50_10830 | Q69Q02 | - | 2484994 - 2487084 | 81372.3 |
| alpha-amylase | DYE50_10835 | P07190 | + | 2487278 - 2490886 | 138631.0 |
| pyridoxal-phosphate dependent enzyme | DYE50_10840 | P00934 | - | 2490867 - 2492174 | 48140.4 |
| duf3943 domain-containing protein | DYE50_10845 | Not Available | - | 2492196 - 2493701 | 57461.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DYE50_10850 | O34340 | - | 2493723 - 2494988 | 44231.4 |
| extracellular solute-binding protein | DYE50_10855 | Q795R2 | - | 2495080 - 2496666 | 59362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
