Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf192 domain-containing protein | DYE50_10760 | Not Available | - | 2472793 - 2473239 | 16782.5 |
| hypothetical protein | DYE50_10765 | Not Available | - | 2473273 - 2473800 | 19874.6 |
| camp-binding protein | DYE50_10770 | Q79VI7 | - | 2473808 - 2475004 | 45420.2 |
| udp-n-acetylmuramate dehydrogenase | DYE50_10775 | Q73RJ5 | - | 2475101 - 2476204 | 39768.4 |
| cysteine--trna ligase | DYE50_10780 | Q73RJ6 | + | 2476179 - 2477735 | 57970.8 |
| rna polymerase sigma factor | DYE50_10785 | Q06198 | + | 2477788 - 2478336 | 21120.4 |
| hypothetical protein | DYE50_10790 | Not Available | + | 2478320 - 2479156 | 30520.8 |
| hypothetical protein | DYE50_10795 | P31835 | + | 2479125 - 2480885 | 65151.8 |
| ump kinase | DYE50_10800 | Q2FR36 | + | 2480898 - 2481593 | 25037.9 |
| lytic transglycosylase domain-containing protein | DYE50_10805 | Q07568 | - | 2481655 - 2482326 | 25188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
