Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iia dna topoisomerase subunit b | DYE50_10610 | Q59189 | + | 2439877 - 2441622 | 65617.1 |
| dna topoisomerase iv subunit a | DYE50_10615 | O51066 | + | 2441639 - 2443609 | 74632.7 |
| diguanylate cyclase | DYE50_10620 | Not Available | + | 2443687 - 2444949 | 48513.3 |
| diguanylate cyclase | DYE50_10625 | Not Available | + | 2444850 - 2445236 | 14817.6 |
| hypothetical protein | DYE50_10630 | Not Available | + | 2445240 - 2446145 | 34126.4 |
| hypothetical protein | DYE50_10635 | Not Available | - | 2446231 - 2446596 | 14279.5 |
| yigz family protein | DYE50_10640 | P44842 | + | 2446723 - 2447313 | 21406.5 |
| hypothetical protein | DYE50_10645 | Not Available | + | 2447371 - 2447934 | 21196.4 |
| duf4445 domain-containing protein | DYE50_10650 | P0DX10 | + | 2448024 - 2449463 | 51504.5 |
| acetyl-coa synthetase | DYE50_10655 | Q3UNX5 | - | 2449460 - 2451127 | 63099.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
