Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | DYE50_10560 | O51693 | - | 2431809 - 2433908 | 77998.3 |
| abc transporter | DYE50_10565 | P0AFQ4 | - | 2433914 - 2434639 | 26632.1 |
| atp-binding cassette domain-containing protein | DYE50_10570 | P54592 | - | 2434650 - 2435591 | 34670.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DYE50_10575 | Not Available | + | 2435783 - 2436091 | 11728.9 |
| type ii toxin-antitoxin system vapc family toxin | DYE50_10580 | Q4UNB2 | + | 2436091 - 2436540 | 17102.3 |
| had family phosphatase | DYE50_10585 | Q9X0Y1 | + | 2436543 - 2437304 | 28880.1 |
| hypothetical protein | DYE50_10590 | Not Available | - | 2437308 - 2437898 | 22871.1 |
| hypothetical protein | DYE50_10595 | Not Available | + | 2438029 - 2438424 | 15092.9 |
| xre family transcriptional regulator | DYE50_10600 | Not Available | + | 2438424 - 2438738 | 11930.5 |
| small multidrug export protein | DYE50_10605 | Not Available | - | 2438758 - 2439252 | 17606.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
