Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DYE50_10510 | Q89AI9 | - | 2421740 - 2422708 | 35220.6 |
| rlme family rna methyltransferase | DYE50_10515 | Q73L97 | - | 2422747 - 2423340 | 21974.5 |
| ribonuclease y | DYE50_10520 | Q73R54 | + | 2423592 - 2425127 | 58114.5 |
| lps export abc transporter atp-binding protein | DYE50_10525 | P45073 | - | 2425270 - 2426145 | 32106.6 |
| organic solvent tolerance protein osta | DYE50_10530 | Not Available | - | 2426142 - 2426888 | 27514.0 |
| lps export abc transporter periplasmic protein lptc | DYE50_10535 | Not Available | - | 2426980 - 2427579 | 21943.4 |
| protein-glutamate o-methyltransferase cher | DYE50_10540 | O51069 | + | 2427704 - 2428519 | 31572.9 |
| chemotaxis response regulator protein-glutamate methylesterase | DYE50_10545 | P62646 | + | 2428595 - 2429803 | 43656.7 |
| gtp-binding protein | DYE50_10550 | P94400 | - | 2429858 - 2431120 | 47351.5 |
| duf4340 domain-containing protein | DYE50_10555 | Not Available | - | 2431222 - 2431806 | 21058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
