Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | DYE50_10160 | Q73K92 | - | 2334662 - 2337256 | 96471.6 |
| 30s ribosomal protein s4 | DYE50_10165 | A0Q1B0 | - | 2337407 - 2338000 | 22650.7 |
| c4-dicarboxylate abc transporter substrate-binding protein | DYE50_10170 | Q312S0 | + | 2338271 - 2339293 | 37543.4 |
| 3'-5' exonuclease | DYE50_10175 | O83649 | - | 2339294 - 2339881 | 22105.6 |
| phospho-sugar mutase | DYE50_10180 | P18159 | - | 2340163 - 2341941 | 64706.7 |
| phosphoglucomutase | DYE50_10185 | A7ZB08 | - | 2341951 - 2343771 | 66267.9 |
| aec family transporter | DYE50_10190 | Not Available | - | 2343819 - 2344832 | 36609.1 |
| arginine--trna ligase | DYE50_10195 | Q73P28 | + | 2344952 - 2346781 | 67766.1 |
| phosphodiesterase | DYE50_10200 | P67097 | + | 2346831 - 2347421 | 21714.3 |
| gtp pyrophosphokinase family protein | DYE50_10205 | P39583 | - | 2347715 - 2348317 | 23267.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
