Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DYE50_10005 | Q8CN40 | + | 2302473 - 2303273 | 28980.3 |
| nicotinate phosphoribosyltransferase | DYE50_10010 | O32090 | + | 2303344 - 2304795 | 54634.6 |
| helix-turn-helix domain-containing protein | DYE50_10015 | Not Available | - | 2304864 - 2305589 | 28299.7 |
| lps-assembly protein lptd | DYE50_10020 | Q2NZI7 | - | 2305851 - 2309141 | 122442.0 |
| excinuclease abc subunit uvra | DYE50_10025 | O83527 | - | 2309189 - 2312074 | 106711.0 |
| azld domain-containing protein | DYE50_10030 | Not Available | - | 2312109 - 2312423 | 11446.6 |
| branched-chain amino acid abc transporter permease | DYE50_10035 | O28519 | - | 2312428 - 2313132 | 24900.7 |
| Trna-gln | Not Available | Not Available | + | 2313401 - 2313474 | Not Available |
| ribosome small subunit-dependent gtpase a | DYE50_10050 | O51126 | + | 2313613 - 2314602 | 36797.7 |
| endonuclease muts2 | DYE50_10055 | Q73MQ8 | + | 2314635 - 2317220 | 96207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
