Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | DYE50_09905 | O83453 | + | 2287178 - 2287672 | 18580.7 |
| degt/dnrj/eryc1/strs aminotransferase family protein | DYE50_09910 | A4WAM5 | + | 2287672 - 2288739 | 38745.8 |
| nad(+)/nadh kinase | DYE50_09915 | Q73MB8 | + | 2288749 - 2289600 | 30626.0 |
| dna repair protein recn | DYE50_09920 | O83456 | + | 2289593 - 2291365 | 64256.0 |
| hypothetical protein | DYE50_09925 | Not Available | + | 2291365 - 2292168 | 30367.8 |
| hd domain-containing protein | DYE50_09930 | Not Available | + | 2292168 - 2293400 | 47968.7 |
| lysm peptidoglycan-binding domain-containing protein | DYE50_09935 | Q46798 | + | 2293500 - 2294504 | 34863.1 |
| Trna-asp | Not Available | Not Available | + | 2294587 - 2294663 | Not Available |
| Trna-pro | Not Available | Not Available | + | 2294703 - 2294775 | Not Available |
| septal ring lytic transglycosylase rlpa family protein | DYE50_09950 | Q9PHM1 | + | 2294838 - 2295503 | 24743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
