Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DYE50_09855 | P9WMH8 | - | 2271742 - 2272038 | 10829.9 |
| 3-dehydroquinate synthase | DYE50_09860 | A8GZ30 | - | 2272173 - 2273345 | 43102.9 |
| hypothetical protein | DYE50_09865 | Not Available | - | 2273366 - 2273977 | 24839.8 |
| dtmp kinase | DYE50_09870 | O83373 | - | 2273981 - 2274601 | 23477.2 |
| hypothetical protein | DYE50_09875 | O83344 | + | 2274759 - 2279234 | 164061.0 |
| outer membrane protein assembly factor bama | DYE50_09880 | O83346 | + | 2279249 - 2281684 | 91729.4 |
| omph family outer membrane protein | DYE50_09885 | Not Available | + | 2281698 - 2282219 | 19594.3 |
| dna mismatch repair protein muts | DYE50_09890 | P61672 | + | 2282221 - 2284893 | 100268.0 |
| comf family protein | DYE50_09895 | P31773 | + | 2284968 - 2285759 | 30443.7 |
| nad(p)-dependent oxidoreductase | DYE50_09900 | Q8U195 | + | 2285875 - 2287164 | 46203.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
