Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tatd family deoxyribonuclease | DYE50_09805 | P37545 | + | 2260812 - 2261675 | 33087.6 |
| glucose-6-phosphate isomerase | DYE50_09810 | Q73K18 | - | 2261888 - 2263474 | 57247.1 |
| suf system nifu family fe-s cluster assembly protein | DYE50_09815 | Q9A1G2 | - | 2263593 - 2264066 | 17204.7 |
| ghkl domain-containing protein | DYE50_09820 | Q8E3C7 | - | 2264085 - 2265422 | 50700.2 |
| dna-binding response regulator | DYE50_09825 | P0A4H9 | - | 2265449 - 2266129 | 25418.5 |
| nadp-dependent isocitrate dehydrogenase | DYE50_09830 | Q75JR2 | + | 2266308 - 2267504 | 44580.5 |
| hypothetical protein | DYE50_09835 | Not Available | - | 2267621 - 2268424 | 30169.5 |
| fe-s cluster assembly atpase sufc | DYE50_09840 | P80866 | + | 2268553 - 2269293 | 27268.1 |
| fe-s cluster assembly protein sufb | DYE50_09845 | Q4L4T1 | + | 2269296 - 2270702 | 52017.3 |
| sufd family fe-s cluster assembly protein | DYE50_09850 | O32165 | + | 2270726 - 2271658 | 34340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
